# Environment Variables Several aspects of BayBE can be configured via environment variables. ## Basic Instructions Setting an environment variable with the name `ENVVAR_NAME` is best done before calling any Python code, and must also be done in the same session unless made persistent, e.g. via `.bashrc` or similar: ```bash ENVAR_NAME="my_value" python do_baybe_work.py ``` Or on Windows: ```shell set ENVAR_NAME=my_value ``` Note that variables set in this manner are interpreted as text, but converted internally to the needed format. See for instance the [`strtobool`](baybe.utils.boolean.strtobool) converter for values that can be set so BayBE can interpret them as booleans. It is also possible to set environment variables in Python: ```python import os os.environ["ENVAR_NAME"] = "my_value" # proceed with BayBE code ... ``` However, this needs to be done carefully at the entry point of your script or session and will not persist between sessions. ## Telemetry ```{admonition} Telemetry Scope :class: important BayBE collects anonymous usage statistics **only** for employees of Merck KGaA, Darmstadt, Germany and/or its affiliates. The recording of metrics is turned off for all other users and impossible due to a VPN block. In any case, the usage statistics do **not** involve logging of recorded measurements, targets or any project information that would allow for reconstruction of details. The user and host machine names are anonymized. ``` Monitored quantities: * `batch_size` used when querying recommendations * Number of parameters in the search space * Number of constraints in the search space * How often [`recommend`](baybe.campaign.Campaign.recommend) was called * How often [`add_measurements`](baybe.campaign.Campaign.add_measurements) was called * How often a search space is newly created * How often initial measurements are added before recommendations were calculated ("naked initial measurements") * The fraction of measurements added that correspond to previous recommendations * Each measurement is associated with a truncated hash of the user- and hostname The following environment variables control the behavior of BayBE telemetry: - `BAYBE_TELEMETRY_ENABLED`: Flag that can turn off telemetry entirely (default is `True`). To turn it off set it to `False`. - `BAYBE_TELEMETRY_ENDPOINT`: The receiving endpoint URL for telemetry data. - `BAYBE_TELEMETRY_VPN_CHECK`: Flag turning an initial telemetry connectivity check on/off (default is `True`). - `BAYBE_TELEMETRY_VPN_CHECK_TIMEOUT`: The timeout in seconds for the check whether the endpoint URL is reachable. - `BAYBE_TELEMETRY_USERNAME`: The name of the user executing BayBE code. Defaults to a truncated hash of the username according to the OS. - `BAYBE_TELEMETRY_HOSTNAME`: The name of the machine executing BayBE code. Defaults to a truncated hash of the machine name. ```{admonition} Uninstalling Internet Packages :class: important If you do not trust the instructions above, you are free to uninstall all internet-related packages such as `opentelemetry*` or its secondary dependencies. These are being shipped in the default dependencies because there is no good way of creating opt-out dependencies, but the baybe package will work without them. ``` ## Polars If BayBE was installed with the additional `polars` dependency (`baybe[polars]`), it will use the advanced methods of Polars to create the searchspace lazily and perform a streamed evaluation of constraints. This will improve speed and memory consumption during this process, and thus might be beneficial for very large search spaces. Since this is still somewhat experimental, you might want to deactivate Polars without changing the Python environment. To do so, you can set the environment variable `BAYBE_DEACTIVATE_POLARS` to any value. ## Disk Caching For some components, such as the [`SubstanceParameter`](baybe.parameters.substance.SubstanceParameter), some of the computation results are cached in local storage. By default, BayBE determines the location of temporary files on your system and puts cached data into a subfolder `.baybe_cache` there. If you want to change the location of the disk cache, change: ```bash BAYBE_CACHE_DIR="/path/to/your/desired/cache/folder" ``` By setting ```bash BAYBE_CACHE_DIR="" ``` you can turn off disk caching entirely. ## Floating Point Precision In general, double precision is recommended because numerical stability during optimization can be bad when single precision is used. This impacts gradient-based optimization, i.e. search spaces with continuous parameters, more than optimization without gradients. If you still want to use single precision, you can set the following boolean variables: - `BAYBE_NUMPY_USE_SINGLE_PRECISION` (defaults to `False`) - `BAYBE_TORCH_USE_SINGLE_PRECISION` (defaults to `False`) ```{admonition} Continuous Constraints in Single Precision :class: warning Currently, due to explicit casting in BoTorch, [`ContinuousConstraint`](baybe.constraints.base.ContinuousConstraint)s do not support single precision and cannot be used if the corresponding environment variables are activated. ```